STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7ILU6Ankyrin. (731 aa)    
Predicted Functional Partners:
A0A1J7IUB3
Uncharacterized protein.
    
 0.639
A0A1J7JDZ3
Serine/threonine-protein phosphatase.
    
  0.619
A0A1J7IJQ5
GP-PDE domain-containing protein.
    
 0.614
A0A1J7IXC0
Uncharacterized protein.
    
  0.602
A0A1J7J5Q8
Polyubiquitin.
   
  0.602
A0A1J7ING1
Sumo conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.593
A0A1J7IT45
Uncharacterized protein.
    
  0.586
A0A1J7J1G6
E3 ubiquitin ligase complex SCF subunit scon-3; Belongs to the SKP1 family.
    
  0.586
A0A1J7J3E4
POZ domain-containing protein; Belongs to the SKP1 family.
    
  0.586
A0A1J7ILG2
Cullin-domain-containing protein; Belongs to the cullin family.
    
  0.582
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.