STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IM53WSC domain-containing protein. (172 aa)    
Predicted Functional Partners:
A0A1J7JCI6
CNH-domain-containing protein.
    
 0.869
A0A1J7JV23
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.612
A0A1J7IIA8
Uncharacterized protein.
   
 0.606
A0A1J7IIJ7
Uncharacterized protein.
   
 0.606
A0A1J7J4D8
Uncharacterized protein.
   
 0.606
A0A1J7J6C4
dUTP pyrophosphatase.
   
 0.606
A0A1J7J790
NTF2-like protein.
    
 0.605
A0A1J7J664
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.598
A0A1J7J5E1
Polyubiquitin-tagged protein recognition complex, Npl4 component.
    
 0.597
A0A1J7JFG5
Replication protein A, subunit RPA32.
    
  0.592
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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