STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7INS0P-loop containing nucleoside triphosphate hydrolase protein. (245 aa)    
Predicted Functional Partners:
A0A1J7IYA8
Pantoate-beta-alanine ligase-like protein.
     
 0.852
A0A1J7J366
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
  0.806
A0A1J7JGC9
Got1 family protein.
    
  0.751
A0A1J7IAG4
Flavo protein.
   
 
 0.678
A0A1J7IEB5
Flavo protein.
   
 
 0.678
A0A1J7IU09
Phosphopantothenate-cysteine ligase-like protein.
   
 
 0.678
A0A1J7IUP0
Metallophos domain-containing protein.
    
  0.532
A0A1J7J392
Metallophos domain-containing protein.
    
  0.532
A0A1J7JG38
Metallo-dependent phosphatase; Belongs to the 5'-nucleotidase family.
    
  0.531
A0A1J7JCY3
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
 
   
  0.476
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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