STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IP80TPR-like protein. (208 aa)    
Predicted Functional Partners:
A0A1J7JYY3
Uncharacterized protein.
    
 
 0.883
A0A1J7JNX9
Protein transporter Sec61 subunit gamma.
   
 
 0.876
A0A1J7IZS9
Translocation protein sec63.
    
 
 0.875
A0A1J7IVG6
Translocation protein.
    
 
 0.874
A0A1J7IS64
Protein transport protein SEC61 alpha subunit.
    
 
 0.867
A0A1J7JAC2
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.825
A0A1J7IKC5
Mo25-like protein.
   
 0.770
A0A1J7IGA0
Uncharacterized protein.
    
 
 0.700
A0A1J7IBX1
Non-specific serine/threonine protein kinase.
   
  0.556
A0A1J7J0E6
Kinase-like protein.
   
  0.556
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.