STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IPR1Glycoside hydrolase family 16 protein. (278 aa)    
Predicted Functional Partners:
A0A1J7K172
Amidase signature enzyme.
    
 0.634
A0A1J7IF02
WD40 repeat-like protein.
    
 0.625
A0A1J7IMB6
B30.2/SPRY domain-containing protein.
    
 0.623
A0A1J7J5S8
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.612
A0A1J7INH6
Uncharacterized protein.
    
 0.610
A0A1J7IS21
UBA domain-containing protein.
    
 0.609
A0A1J7IAA8
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.604
A0A1J7IYH2
WD domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.598
A0A1J7IXC0
Uncharacterized protein.
    
  0.596
A0A1J7IMD8
Nucleoporin-domain-containing protein.
    
 0.593
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.