STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IQH3Rho-GAP domain-containing protein. (417 aa)    
Predicted Functional Partners:
A0A1J7JKQ3
AMPKBI-domain-containing protein.
   
 0.985
A0A1J7JE04
Non-specific serine/threonine protein kinase.
   
 0.980
A0A1J7JUX9
Uncharacterized protein.
   
 0.943
A0A1J7IBX1
Non-specific serine/threonine protein kinase.
   
 0.914
A0A1J7J0E6
Kinase-like protein.
   
 0.914
A0A1J7J324
Kinase-like protein.
    
 0.893
A0A1J7IK99
Tryptophan synthase.
  
 
 0.889
A0A1J7J3I0
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 
 0.861
A0A1J7JJ64
Pkinase-domain-containing protein.
    
 0.856
A0A1J7JRG5
GMP synthase.
  
 0.853
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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