STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IT22Sugar 1,4-lactone oxidase. (544 aa)    
Predicted Functional Partners:
A0A1J7JTX4
SGL domain-containing protein.
  
 
 0.836
A0A1J7J503
Mitochondrial cytochrome-like protein b2; Belongs to the cytochrome b5 family.
  
 0.802
A0A1J7J779
FMN-dependent dehydrogenase.
  
 0.802
A0A1J7JDV3
Cytochrome b5; Belongs to the cytochrome b5 family.
  
 0.802
A0A1J7JJ33
Uncharacterized protein.
  
 0.802
A0A1J7JQP9
Cytochrome b2; Belongs to the cytochrome b5 family.
  
 0.802
A0A1J7I5G8
LmbE-like protein.
     
 0.715
A0A1J7J773
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.688
A0A1J7IY82
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 0.661
A0A1J7IAN6
Beta-lactamase/transpeptidase-like protein.
     
 0.640
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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