STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7ITD8Chromatin modifying protein 1b. (209 aa)    
Predicted Functional Partners:
A0A1J7I8U8
DUF605-domain-containing protein.
    
 0.997
A0A1J7J1B2
Vacuolar assembly/sorting protein.
   
 0.996
A0A1J7IIQ7
Uncharacterized protein.
   
 0.991
A0A1J7JC75
Vacuolar protein sorting-associated protein VPS4; Belongs to the AAA ATPase family.
   
 0.991
A0A1J7I7K7
Vacuolar-sorting protein SNF7.
    
 0.990
A0A1J7JDC1
Uncharacterized protein.
   
 0.990
A0A1J7JFK6
DUF292-domain-containing protein.
    
 
 0.988
A0A1J7J2H8
Uncharacterized protein.
   
 0.939
A0A1J7IXD5
Uncharacterized protein.
    
 0.906
A0A1J7IHC7
AAA-domain-containing protein; Belongs to the AAA ATPase family.
    
 0.886
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.