STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7ITT6ANK_REP_REGION domain-containing protein. (648 aa)    
Predicted Functional Partners:
A0A1J7J2D3
AAA ATPase; Belongs to the AAA ATPase family.
   
 
 0.830
A0A1J7J3R5
Uncharacterized protein.
   
 
 0.830
A0A1J7JK69
ATPase_AAA_core domain-containing protein.
   
 
 0.830
A0A1J7IYN3
AAA-domain-containing protein.
   
 
 0.825
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
    
   0.811
A0A1J7IUN1
Carbamoyl-phosphate synthase subunit L.
 
 
    0.789
A0A1J7I9G5
ATPase.
   
 
 0.780
A0A1J7JDZ7
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.707
A0A1J7I7B6
Cytosolic large ribosomal subunit protein L30.
    
   0.698
A0A1J7I895
60S ribosomal protein L5.
    
   0.698
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.