STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IUU3Piwi-domain-containing protein. (1100 aa)    
Predicted Functional Partners:
A0A1J7JID6
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the helicase family. Dicer subfamily.
 
 
 0.959
A0A1J7JPV9
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
   
 0.956
A0A1J7J2D7
Ribonuclease III.
    
 0.923
A0A1J7IXN5
Ribonuclease III.
    
 0.895
A0A1J7IFD6
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.804
A0A1J7JBJ2
ARM repeat-containing protein.
    
 0.793
A0A1J7IL04
Translin.
    
 0.783
A0A1J7IM37
Translin.
   
 0.767
A0A1J7IIS8
Antiviral helicase.
    
 0.758
A0A1J7J042
ATP-dependent RNA helicase DHH1; Belongs to the DEAD box helicase family.
   
 
 0.745
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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