STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IW35RBR-type E3 ubiquitin transferase. (543 aa)    
Predicted Functional Partners:
A0A1J7IXT1
DUF676-domain-containing protein.
 
      0.868
A0A1J7IXC0
Uncharacterized protein.
    
  0.643
A0A1J7I591
Uncharacterized protein.
    
  0.602
A0A1J7I9Q9
RBR-type E3 ubiquitin transferase.
    
  0.602
A0A1J7IK02
RBR-type E3 ubiquitin transferase.
    
  0.602
A0A1J7JFV2
RBR-type E3 ubiquitin transferase.
    
 
0.602
A0A1J7JJ00
Uncharacterized protein.
    
  0.602
A0A1J7IC37
BZIP domain-containing protein.
    
  0.601
A0A1J7IC60
CIA30-domain-containing protein.
    
  0.601
A0A1J7JAR5
Ubiquitin-domain-containing protein.
    
  0.601
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.