STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IXA03-isopropylmalate dehydratase. (690 aa)    
Predicted Functional Partners:
A0A1J7J5S6
3-isopropylmalate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
 
 0.951
A0A1J7IJ80
Citrate synthase; Belongs to the citrate synthase family.
  
 0.903
A0A1J7JDL0
Citrate synthase; Belongs to the citrate synthase family.
  
 0.903
A0A1J7K3J6
Nedd8-specific protease-like protein.
  
 
 0.878
A0A1J7JTW8
D-malate dehydrogenase.
 
 0.861
A0A1J7JQV8
Tartrate dehydrogenase.
 
 0.847
A0A1J7IGP1
Haloacid dehalogenase.
  
 0.842
A0A1J7JIN7
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.842
A0A1J7JN23
Uncharacterized protein.
  
 0.842
A0A1J7JK70
Isocitrate/isopropylmalate dehydrogenase.
 
 0.832
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.