STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IYN9mRNA triphosphatase CET1. (817 aa)    
Predicted Functional Partners:
A0A1J7J2C2
TYR_PHOSPHATASE_2 domain-containing protein.
    
 0.992
A0A1J7IHX2
Lish protein.
   
 0.900
A0A1J7IPD4
Transcription initiation factor TFIID subunit-like protein.
   
 0.860
A0A1J7IY00
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
   
 
 0.856
A0A1J7J9R3
TFIID_20kDa domain-containing protein.
    
 0.856
A0A1J7JU37
SCA7-domain-containing protein.
    
 0.855
A0A1J7I426
Uncharacterized protein.
    
 0.851
A0A1J7I667
TAF10-like protein.
    
 0.850
A0A1J7JFG0
LCM-domain-containing protein.
    
 0.839
A0A1J7I477
TFIID-31kDa-domain-containing protein.
    
 0.837
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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