STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IZ13Alkaline serine protease. (684 aa)    
Predicted Functional Partners:
A0A1J7IUB3
Uncharacterized protein.
    
 0.593
A0A1J7K172
Amidase signature enzyme.
    
  0.510
A0A1J7JUL7
TPR-like protein.
    
  0.491
A0A1J7IPM4
Uncharacterized protein.
    
  0.488
A0A1J7IQG3
POT1PC domain-containing protein.
    
 0.488
A0A1J7J5J5
Ubiquitin-like protein.
    
  0.474
A0A1J7J2F2
MRG-domain-containing protein.
    
  0.461
A0A1J7J6F4
TH14-3-3 protein; Belongs to the 14-3-3 family.
   
  0.443
A0A1J7JKM5
14-3-3 protein.
   
  0.443
A0A1J7K016
14-3-3 family protein; Belongs to the 14-3-3 family.
   
  0.443
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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