STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7IZ47Class 5 chitinase 1; Belongs to the glycosyl hydrolase 18 family. (420 aa)    
Predicted Functional Partners:
A0A1J7IR25
Uncharacterized protein.
 
      0.887
A0A1J7J9J9
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.665
A0A1J7J332
COX5B-domain-containing protein.
   
 0.654
A0A1J7IIP5
Cytochrome-c oxidase chain VIIc.
   
 0.651
A0A1J7ITS8
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.644
A0A1J7IPH9
Uncharacterized protein.
   
 0.637
A0A1J7JJ29
Uncharacterized protein.
   
 0.637
A0A1J7JLZ2
Cytochrome c oxidase polypeptide VI.
   
 0.637
A0A1J7IK80
Cytochrome c oxidase subunit IV.
   
 0.618
A0A1J7IWS7
COX2-domain-containing protein.
    
 0.615
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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