STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7J1Z854S ribosomal protein L12. (179 aa)    
Predicted Functional Partners:
A0A1J7I895
60S ribosomal protein L5.
  
 
 0.993
A0A1J7IKP4
Ribosomal protein L24.
  
 
 0.993
A0A1J7INY9
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.993
A0A1J7IPJ6
Uncharacterized protein.
  
 
 0.993
A0A1J7J0T1
40S ribosomal protein S3-like protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.993
A0A1J7J3A8
Ribosomal_L23eN domain-containing protein.
  
 
 0.993
A0A1J7J6Y3
Uncharacterized protein.
  
 
 0.993
A0A1J7JQA9
Putative ribosomal protein S12, cytosolic; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.993
A0A1J7JYF3
Uncharacterized protein.
  
 
 0.993
A0A1J7IK09
Uncharacterized protein.
   
 
 0.992
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.