STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7J2X460S ribosomal protein L7. (250 aa)    
Predicted Functional Partners:
A0A1J7I7B6
Cytosolic large ribosomal subunit protein L30.
   
 0.999
A0A1J7I895
60S ribosomal protein L5.
  
 0.999
A0A1J7IAH9
L30e-like protein.
  
 0.999
A0A1J7IBI7
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.999
A0A1J7IEK9
Putative 60S ribosomal protein L31.
   
 0.999
A0A1J7IEX7
40S ribosomal protein S23-like protein; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.999
A0A1J7IF09
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.999
A0A1J7IFU4
60S ribosomal protein L20.
   
 0.999
A0A1J7IKP4
Ribosomal protein L24.
  
 0.999
A0A1J7INY9
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.999
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.