STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7J3D5RTA1-domain-containing protein. (291 aa)    
Predicted Functional Partners:
A0A1J7IYZ5
Uridine kinase; Belongs to the uridine kinase family.
    
 0.598
A0A1J7JJC1
PRTase-like protein.
    
 0.598
A0A1J7JQ55
Uracil phosphoribosyltransferase.
    
 0.598
A0A1J7J9J1
Nicotinamide riboside kinase 1.
    
  0.586
A0A1J7K1U1
6-phosphogluconate dehydrogenase C-terminal domain-like protein.
   
 
 0.565
A0A1J7JCS9
Atg29_N domain-containing protein.
    
  0.476
A0A1J7JGN0
Rho-type GTPase-activating protein.
   
  0.466
A0A1J7J772
Protein kinase domain-containing protein.
    
  0.439
A0A1J7I936
Uncharacterized protein.
    
  0.411
A0A1J7IGZ5
GTPase-activator protein for ras-like GTPase.
    
  0.411
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
Server load: low (22%) [HD]