STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7J5N6GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (219 aa)    
Predicted Functional Partners:
A0A1J7JE51
Importin N-terminal domain-containing protein.
   
 0.994
A0A1J7ITU4
ARM repeat-containing protein.
   
 0.993
A0A1J7IH60
ARM repeat-containing protein.
    
 0.990
A0A1J7J3C7
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.990
A0A1J7J1C2
Uncharacterized protein.
   
 0.989
A0A1J7J2F0
RanBD1 domain-containing protein.
   
 0.989
A0A1J7J1B7
Uncharacterized protein.
   
 0.982
A0A1J7J757
Ran GTPase activating protein 1.
   
 0.982
A0A1J7IVL8
PH domain-like protein.
   
 0.980
A0A1J7IB03
RCC1/BLIP-II protein.
   
 0.979
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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