STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7J7R4Cystathionine gamma-synthase. (443 aa)    
Predicted Functional Partners:
A0A1J7J2D1
PALP-domain-containing protein.
 
 0.946
A0A1J7JKZ1
Pyridoxal phosphate-dependent enzyme, beta subunit.
 
 0.946
A0A1J7IJE7
Cobalamin-independent methionine synthase.
  
 
 0.918
A0A1J7IK99
Tryptophan synthase.
  
 
 0.903
A0A1J7JW74
Homocysteine S-methyltransferase.
  
 
 0.902
A0A1J7IR01
Cystathionine gamma-synthase.
  
 
 0.900
A0A1J7JMB3
Uncharacterized protein.
 
  
   0.897
A0A1J7IDD1
Homoserine dehydrogenase.
 
 
 0.893
A0A1J7I5J5
UROD/MetE-like protein.
  
 
 0.889
A0A1J7JH98
UROD/MetE-like protein.
  
 
 0.885
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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