STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7J807Uncharacterized protein. (433 aa)    
Predicted Functional Partners:
A0A1J7IQI5
Spindle pole body component.
    
 0.831
A0A1J7JN69
Carboxyl transferase.
   
 0.804
A0A1J7IVT9
Spindle pole body component.
    
 0.738
A0A1J7J786
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.673
A0A1J7IVM9
Spindle pole body component.
    
 0.656
A0A1J7IQA4
Nucleoside diphosphate kinase.
    
 0.650
A0A1J7IWS2
Spindle pole body component.
    
 0.649
A0A1J7IXY1
Uncharacterized protein.
    
 0.649
A0A1J7JGW8
Spindle pole body component.
    
 0.649
A0A1J7J4G4
Uncharacterized protein.
   
 0.637
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.