STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7J8C6Putative N-acetyltransferase, GNAT family. (181 aa)    
Predicted Functional Partners:
A0A1J7JFF1
Mak10 subunit.
   
 0.941
A0A1J7IRZ4
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.850
A0A1J7I9C4
Sm domain-containing protein.
    
 0.710
A0A1J7J571
Sm-like ribonucleo protein.
    
 0.710
A0A1J7J3P2
Aspartate aminotransferase.
     
 0.527
A0A1J7IN52
Glutamine-hydrolyzing asparagine synthase.
     
 0.521
A0A1J7JG67
Aspartate aminotransferase.
   
 
  0.521
A0A1J7IGI7
Uncharacterized protein.
   
 
  0.436
A0A1J7IUD0
Uncharacterized protein.
   
 
  0.436
A0A1J7IYY5
Arginosuccinate synthetase.
   
 
  0.436
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.