STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JAW0Glycoside hydrolase. (606 aa)    
Predicted Functional Partners:
A0A1J7IJB4
Glycoside hydrolase.
  
 
 0.713
A0A1J7J5I4
Glycoside hydrolase.
  
 
 0.713
A0A1J7J543
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.705
A0A1J7JJM8
Glycoside hydrolase family 65 protein.
  
 
 0.651
A0A1J7J9K6
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
  
 
 0.650
A0A1J7J4H4
Phosphoglucomutase 2; Belongs to the phosphohexose mutase family.
  
 
 0.614
A0A1J7I4E1
Amino acid transporter.
    
 0.607
A0A1J7I669
Amidase.
    
 0.607
A0A1J7I7X9
High affinity methionine permease.
    
 0.607
A0A1J7I931
Amino acid transporter.
    
 0.607
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.