STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JBC0Glycoside hydrolase family 93 protein. (385 aa)    
Predicted Functional Partners:
A0A1J7IQR4
Cysteine proteinase.
    
  0.520
A0A1J7J0U1
Cysteine proteinase; Belongs to the peptidase C19 family.
    
  0.520
A0A1J7I9G5
ATPase.
    
  0.500
A0A1J7IYN3
AAA-domain-containing protein.
    
  0.500
A0A1J7J2D3
AAA ATPase; Belongs to the AAA ATPase family.
    
  0.500
A0A1J7J3R5
Uncharacterized protein.
    
  0.500
A0A1J7JK69
ATPase_AAA_core domain-containing protein.
    
  0.500
A0A1J7JNN4
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
  0.477
A0A1J7IKE2
Uncharacterized protein.
    
  0.473
A0A1J7I4U2
PEP carboxykinase-like protein.
    
 0.470
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.