STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JCD2Alpha-galactosidase. (480 aa)    
Predicted Functional Partners:
A0A1J7IIC3
Galactose mutarotase-like protein.
   
 
 0.837
A0A1J7ILI3
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
   
 
 0.837
A0A1J7JYM2
Beta-hexosaminidase.
   
 
 0.768
A0A1J7J594
Alpha-galactosidase.
  
  
 
0.760
A0A1J7J065
Alpha-galactosidase.
  
  
 
0.752
A0A1J7JEW1
Glycoside hydrolase family 31 protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.725
A0A1J7INI5
Family 31 glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
     
 0.678
A0A1J7IB83
DUF4982 domain-containing protein.
     
 0.570
A0A1J7JQ94
Glycoside hydrolase.
     
 0.570
A0A1J7I9E6
P/Homo B domain-containing protein.
   
  0.530
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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