STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JGJ0Metal-dependent amidase/aminoacylase/carboxypeptidase. (423 aa)    
Predicted Functional Partners:
A0A1J7JPM5
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.589
A0A1J7JCF4
Glutamate synthase.
    
  0.496
A0A1J7I5I1
Zn-dependent exopeptidase.
    
 0.429
A0A1J7I7X2
CNDP dipeptidase.
    
 0.429
A0A1J7IDC2
Glutathione degradosome.
    
 0.429
A0A1J7IZF6
Carboxypeptidase S.
    
 0.429
A0A1J7J0P7
Putative vacuolar carboxypeptidase Cps1.
    
 0.429
A0A1J7IR69
Peptidase_M1 domain-containing protein.
   
 
  0.409
A0A1J7J694
Aminopeptidase.
   
 
  0.409
A0A1J7JFM6
Leuk-A4-hydro_C domain-containing protein.
   
 
  0.409
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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