STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JGT3SGT1-domain-containing protein. (626 aa)    
Predicted Functional Partners:
A0A1J7J423
Uncharacterized protein.
    
 
 0.945
A0A1J7J431
Pre-mRNA processing splicing factor 8.
    
 
 0.911
A0A1J7I721
Uncharacterized protein.
    
 
 0.811
A0A1J7J7D9
Sec63-domain-containing protein.
    
 
 0.811
A0A1J7J989
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.741
A0A1J7JHM2
WD40 repeat-like protein.
    
   0.639
A0A1J7IYQ2
Activating signal cointegrator 1 complex subunit 3.
   
 
 0.605
A0A1J7IDS7
Metalloprotease.
   
 
 0.595
A0A1J7J6G7
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.595
A0A1J7J4R1
SGS-domain-containing protein.
      
 0.518
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.