STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JHD1Glycoside hydrolase family 55 protein. (761 aa)    
Predicted Functional Partners:
A0A1J7IUB3
Uncharacterized protein.
    
 0.698
A0A1J7IXZ4
CDC73-domain-containing protein.
    
 0.671
A0A1J7J5T2
Uncharacterized protein.
    
 0.665
A0A1J7JAR2
Anaphase-promoting complex subunit Cut9.
    
 0.664
A0A1J7I5M7
Galactose-binding like protein.
    
 0.660
A0A1J7J019
Putative 20S cyclosome subunit.
    
 0.658
A0A1J7K0L9
Uncharacterized protein.
    
 0.657
A0A1J7ITE2
Anaphase-promoting complex protein.
    
 0.656
A0A1J7K5V4
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.652
A0A1J7IK77
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.630
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.