STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JIN7Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (465 aa)    
Predicted Functional Partners:
A0A1J7JYY6
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
   
 0.961
A0A1J7JFN1
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.953
A0A1J7JDM0
2-oxoglutarate dehydrogenase, E1 component.
   
 
 0.947
A0A1J7JRB7
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
   
 0.946
A0A1J7IP86
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.936
A0A1J7IJ80
Citrate synthase; Belongs to the citrate synthase family.
  
 0.905
A0A1J7JDL0
Citrate synthase; Belongs to the citrate synthase family.
  
 0.905
A0A1J7J3P2
Aspartate aminotransferase.
   
 0.902
A0A1J7JG67
Aspartate aminotransferase.
   
 0.887
A0A1J7JCF4
Glutamate synthase.
    
 0.874
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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