STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JIR54-nitrophenylphosphatase. (313 aa)    
Predicted Functional Partners:
A0A1J7J792
Pyridoxine kinase.
    
 0.876
A0A1J7IW56
Pyridoxamine 5'-phosphate oxidase.
   
 
 0.874
A0A1J7IG18
Putative alpha/beta fold family hydrolase.
  
 
 0.817
A0A1J7J1H0
Alpha/beta-hydrolase.
  
 
 0.817
A0A1J7JZI8
SET domain-containing protein.
 
   
  0.804
A0A1J7JH15
MACPF domain-containing protein.
   
 
 0.799
A0A1J7JN69
Carboxyl transferase.
     
 0.796
A0A1J7JI05
Xanthine dehydrogenase.
     
 0.795
A0A1J7IJQ5
GP-PDE domain-containing protein.
    
  0.780
A0A1J7IJF9
GDPD-domain-containing protein.
    
  0.772
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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