STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JIV9Uncharacterized protein. (198 aa)    
Predicted Functional Partners:
A0A1J7JGN0
Rho-type GTPase-activating protein.
    
 0.998
A0A1J7J5W5
HR1-domain-containing protein.
   
 0.974
A0A1J7JCI6
CNH-domain-containing protein.
    
 0.963
A0A1J7J3U6
RhoGAP-domain-containing protein.
    
 0.947
A0A1J7J5N4
RhoGAP-domain-containing protein.
    
 0.939
A0A1J7JGW0
E set domain-containing protein.
   
 0.936
A0A1J7JU33
Uncharacterized protein.
    
 0.923
A0A1J7J8G0
FH2-domain-containing protein.
    
 0.914
A0A1J7JCS9
Atg29_N domain-containing protein.
   
 0.904
A0A1J7ILQ7
SUN domain-containing protein.
    
 0.877
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.