STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JK29Uncharacterized protein. (434 aa)    
Predicted Functional Partners:
A0A1J7JU47
Uncharacterized protein.
   
   0.988
A0A1J7JW87
ARM repeat-containing protein.
   
   0.988
A0A1J7J3A8
Ribosomal_L23eN domain-containing protein.
   
 0.983
A0A1J7JNE7
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.983
A0A1J7IKP4
Ribosomal protein L24.
   
 0.982
A0A1J7J0Q2
Uncharacterized protein.
   
 0.982
A0A1J7IEK9
Putative 60S ribosomal protein L31.
   
 0.981
A0A1J7IT66
Uncharacterized protein.
   
 0.981
A0A1J7JPU9
Uncharacterized protein.
   
 0.981
A0A1J7I7B6
Cytosolic large ribosomal subunit protein L30.
   
 0.980
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.