STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JKJ2Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
A0A1J7IUB3
Uncharacterized protein.
    
 0.596
A0A1J7IUQ6
WD40 repeat-like protein.
    
  0.592
A0A1J7IPD4
Transcription initiation factor TFIID subunit-like protein.
    
  0.560
A0A1J7J9R3
TFIID_20kDa domain-containing protein.
    
  0.530
A0A1J7IQG3
POT1PC domain-containing protein.
    
  0.527
A0A1J7I477
TFIID-31kDa-domain-containing protein.
    
  0.523
A0A1J7IXC0
Uncharacterized protein.
    
  0.508
A0A1J7JU37
SCA7-domain-containing protein.
    
  0.507
A0A1J7JFG0
LCM-domain-containing protein.
    
  0.505
A0A1J7JM14
Ubiquitin-domain-containing protein.
    
  0.495
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.