STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JLR3Uncharacterized protein. (402 aa)    
Predicted Functional Partners:
A0A1J7JEE4
PLP-dependent transferase.
     
 0.502
A0A1J7JPM5
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
 
 0.501
A0A1J7JPQ6
ALDH-like protein.
   
 0.491
A0A1J7K1H5
Amine oxidase.
   
 
 0.481
A0A1J7JJC1
PRTase-like protein.
   
 
  0.471
A0A1J7IUD3
FSH1 domain-containing protein.
     
 0.469
A0A1J7J3P2
Aspartate aminotransferase.
     
 0.461
A0A1J7I7T8
FAD/NAD(P)-binding domain-containing protein.
   
 
 0.458
A0A1J7JHR3
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
     
 0.453
A0A1J7JB23
PLP-dependent transferase.
     
 0.452
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.