STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JMZ7ECR1_N domain-containing protein. (351 aa)    
Predicted Functional Partners:
A0A1J7I952
Exoribonuclease.
   
 0.999
A0A1J7IRX1
Exosome component 1.
   
 0.999
A0A1J7IUR1
Exosome complex exonuclease RRP43.
   
 0.999
A0A1J7IV43
Uncharacterized protein.
   
 0.999
A0A1J7J6X6
RNase_PH domain-containing protein.
   
 0.999
A0A1J7JBN4
RNase_PH domain-containing protein.
   
 0.999
A0A1J7JJV5
Uncharacterized protein.
   
 0.999
A0A1J7JTJ7
Uncharacterized protein.
   
 0.996
A0A1J7IIS8
Antiviral helicase.
   
 0.992
A0A1J7J4R0
RNB-domain-containing protein; Belongs to the RNR ribonuclease family.
   
 0.990
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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