STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JNB5Fumble-domain-containing protein. (513 aa)    
Predicted Functional Partners:
A0A1J7IU09
Phosphopantothenate-cysteine ligase-like protein.
     
 0.892
A0A1J7IEB5
Flavo protein.
     
 0.891
A0A1J7IYA8
Pantoate-beta-alanine ligase-like protein.
     
 0.890
A0A1J7IER1
Nucleotidylyl transferase.
    
 0.850
A0A1J7IZS4
CoaE-domain-containing protein.
    
 0.752
A0A1J7J245
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.736
A0A1J7JB36
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
 
      0.713
A0A1J7IUN0
Uncharacterized protein.
 
      0.687
A0A1J7IAG4
Flavo protein.
     
 0.635
A0A1J7IPE4
Bifunctional dihydrofolate reductase-thymidylate synthase.
     
 0.627
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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