STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JNI7Uncharacterized protein. (498 aa)    
Predicted Functional Partners:
A0A1J7JEA9
SNF5-domain-containing protein.
    
 0.825
A0A1J7IFD2
Actin/actin-like protein; Belongs to the actin family.
    
 0.793
A0A1J7JFJ2
SWIRM-domain-containing protein.
    
 0.791
A0A1J7JK09
SWIB domain-containing protein.
    
 0.788
A0A1J7IFA8
Bromodomain-containing protein.
    
 0.781
A0A1J7J026
SNF5-like protein.
    
 0.682
A0A1J7I4T8
SWIB-domain-containing protein.
    
 0.668
A0A1J7IW13
Uncharacterized protein.
  
 
  0.665
A0A1J7J295
RNA-binding domain-containing protein.
    
  0.650
A0A1J7IKM6
Uncharacterized protein.
    
 0.636
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.