STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JRF6Trm112p-domain-containing protein. (127 aa)    
Predicted Functional Partners:
A0A1J7J632
MTS domain-containing protein.
    
 0.999
A0A1J7JBB9
2OG-Fe(II) oxygenase.
   
 0.995
A0A1J7J4D0
S-adenosyl-L-methionine-dependent methyltransferase.
   
 0.986
A0A1J7IMU1
tRNA guanosine-2'-O-methyltransferase.
   
 0.985
A0A1J7ILJ3
Uncharacterized protein.
   
 0.982
A0A1J7IRU7
HemK family methyltransferase.
    
 0.979
A0A1J7IKE4
S-adenosyl-L-methionine-dependent methyltransferase.
   
 0.964
A0A1J7JDC7
tRNA wybutosine-synthesizing protein 2; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wybutosine biosynthesis pathway. Wybutosine is a hyper modified guanosine with a tricyclic base found at the 3'-position adjacent to the anticodon of eukaryotic phenylalanine tRNA. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to the C-7 position of 4-demethylwyosine (imG-14) to produce wybutosine-86.
   
 
 0.962
A0A1J7IGM2
S-adenosyl-L-methionine-dependent methyltransferase.
   
 0.890
A0A1J7JQF4
Bystin-domain-containing protein.
   
   0.874
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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