STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JSY8Uncharacterized protein. (1337 aa)    
Predicted Functional Partners:
A0A1J7J5J5
Ubiquitin-like protein.
    
 0.785
A0A1J7IXZ0
DNA repair protein rad18.
   
 0.783
A0A1J7IV81
Ubiquitin-conjugating enzyme E2 35; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.777
A0A1J7IK77
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.773
A0A1J7J6K6
UBC-like protein.
    
 0.761
A0A1J7IZ26
Actin-like ATPase domain-containing protein; Belongs to the actin family.
    
 0.736
A0A1J7IFD2
Actin/actin-like protein; Belongs to the actin family.
   
 0.728
A0A1J7JX93
YL1_C domain-containing protein.
    
 0.727
A0A1J7J7I9
Vezatin domain-containing protein.
  
 0.702
A0A1J7K0T5
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.702
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.