STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JV44pH-response transcription factor pacC/RIM101. (562 aa)    
Predicted Functional Partners:
A0A1J7I5W6
BRO1-domain-containing protein.
    
 
 0.874
A0A1J7J2Z8
Cysteine proteinase; Belongs to the peptidase C2 family.
   
 0.820
A0A1J7JWG0
Arrestin_C domain-containing protein.
    
 
 0.788
A0A1J7IY82
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.779
A0A1J7JGQ9
BRO1-domain-containing protein.
    
 
 0.770
A0A1J7J6C8
Uncharacterized protein.
    
 
 0.758
A0A1J7I7K7
Vacuolar-sorting protein SNF7.
    
 
 0.691
A0A1J7JL56
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.687
A0A1J7IT48
Pali-domain-containing protein.
    
 0.682
A0A1J7JS61
Uncharacterized protein.
    
 
 0.674
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.