STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JWH0Uncharacterized protein. (930 aa)    
Predicted Functional Partners:
A0A1J7JQA9
Putative ribosomal protein S12, cytosolic; Belongs to the universal ribosomal protein uS19 family.
   
 0.881
A0A1J7JII0
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.876
A0A1J7J0T1
40S ribosomal protein S3-like protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.875
A0A1J7IH50
Putative 40S ribosomal protein S20.
   
  0.874
A0A1J7JTT2
PLP-dependent transferase.
     
 0.874
A0A1J7IJA2
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.872
A0A1J7JD49
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.872
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.867
A0A1J7JQI0
Ribosomal protein S14.
   
 0.866
A0A1J7K1U9
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.855
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.