STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1J7JYQ3Uncharacterized protein. (207 aa)    
Predicted Functional Partners:
A0A1J7JQ85
Uncharacterized protein.
   
 
 0.990
A0A1J7INY9
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.984
A0A1J7JN41
Ribosomal protein S16, mitochondrial.
   
   0.983
A0A1J7IC29
Uncharacterized protein.
   
 
 0.980
A0A1J7INA8
Ribosomal protein S12/S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.979
A0A1J7INS7
Ribosomal protein S18.
   
 
 0.977
A0A1J7K5C2
Translational machinery component.
   
 
 0.976
A0A1J7JFP3
MRP-L47-domain-containing protein.
   
 
 0.975
A0A1J7J1M3
Uncharacterized protein.
   
 
 0.972
A0A1J7IGU0
Uncharacterized protein.
   
 
 0.970
Your Current Organism:
Coniochaeta ligniaria
NCBI taxonomy Id: 1408157
Other names: C. ligniaria NRRL 30616, Coniochaeta ligniaria NRRL 30616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.