STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000828655_01958Unannotated protein. (533 aa)    
Predicted Functional Partners:
GCA_000828655_01029
Unannotated protein.
 
 0.990
GCA_000828655_01216
Unannotated protein.
 
 0.967
GCA_000828655_01959
Unannotated protein.
 
  
 0.911
GCA_000828655_01960
Unannotated protein.
       0.832
GCA_000828655_01962
Unannotated protein.
       0.832
GCA_000828655_01961
Unannotated protein.
       0.776
GCA_000828655_01963
Unannotated protein.
       0.758
GCA_000828655_01964
Unannotated protein.
       0.746
GCA_000828655_01965
Unannotated protein.
       0.731
GCA_000828655_01966
Unannotated protein.
       0.731
Your Current Organism:
Thermotoga caldifontis
NCBI taxonomy Id: 1408159
Other names: T. caldifontis AZM44c09, Thermotoga caldifontis AZM44c09, Thermotoga sp. AZM44c09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.