STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000828675_01812Unannotated protein. (298 aa)    
Predicted Functional Partners:
GCA_000828675_01811
Unannotated protein.
0.999
GCA_000828675_01810
Unannotated protein.
  
 
 0.948
GCA_000828675_01539
Unannotated protein.
  
 0.931
GCA_000828675_01631
Unannotated protein.
  
 
 0.915
GCA_000828675_00462
Unannotated protein.
   
 0.884
GCA_000828675_00377
Unannotated protein.
   
 0.879
GCA_000828675_01809
Unannotated protein.
       0.777
GCA_000828675_01807
Unannotated protein.
  
  
 0.769
GCA_000828675_01808
Unannotated protein.
       0.727
GCA_000828675_01806
Unannotated protein.
       0.711
Your Current Organism:
Thermotoga profunda
NCBI taxonomy Id: 1408160
Other names: T. profunda AZM34c06, Thermotoga profunda AZM34c06, Thermotoga sp. AZM34c06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.