STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_9537Zn cluster transcription factor Rds2. (1540 aa)    
Predicted Functional Partners:
T310_2647
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
  0.737
T310_1434
Phosphoribosylformylglycinamidine cyclo-ligase.
    
  0.656
T310_3568
NADH-ubiquinone dehydrogenase 24 kDa subunit.
    
  0.608
T310_4857
Epoxide hydrolase.
   
 
 0.556
T310_6517
FAD dependent oxidoreductase.
    
  0.547
T310_4423
Uncharacterized protein.
    
  0.547
T310_6890
Pyruvate carboxylase.
    
  0.532
T310_4294
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
    
  0.532
T310_4293
Uncharacterized protein.
    
  0.532
T310_3180
Pyruvate carboxylase.
    
  0.532
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.