STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_9946Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (550 aa)    
Predicted Functional Partners:
T310_4506
Glycerophosphocholine phosphodiesterase Gde1.
    
 0.759
T310_2647
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.751
T310_2842
HEAT repeat protein (DRIM).
   
  0.605
T310_6018
Uncharacterized protein.
    
  0.569
T310_5461
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.551
T310_8382
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.548
T310_7895
Small nucleolar ribonucleoprotein complex subunit.
    
  0.548
T310_4892
DUF652 domain-containing protein.
    
  0.548
T310_2136
Ribosome biogenesis protein Noc4.
    
  0.548
T310_1769
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.548
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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