STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_9820Mitochondrial export translocase Oxa1. (494 aa)    
Predicted Functional Partners:
T310_9686
Protein transport protein Sec61 alpha subunit.
   
 0.948
T310_9821
Uncharacterized protein.
 
      0.899
T310_8002
50S ribosomal protein L2.
   
 
 0.863
T310_7390
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.854
T310_3214
Uncharacterized protein.
   
 
 0.850
T310_4173
Uncharacterized protein.
 
      0.847
T310_2694
37S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
   0.847
T310_4152
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.818
T310_0600
50S ribosomal protein L13.
   
 
 0.817
T310_9338
Tryptophan synthase.
   
  
 0.802
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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