STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_9632TPR_REGION domain-containing protein. (323 aa)    
Predicted Functional Partners:
T310_2607
EMC1_C domain-containing protein.
   
 0.992
T310_0909
Uncharacterized protein.
   
 0.992
T310_6937
DUF850 domain-containing protein.
   
 
 0.991
T310_4725
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.989
T310_3781
DUF2012 domain-containing protein.
   
 
 0.941
T310_9633
Uncharacterized protein.
 
  
   0.918
T310_8383
Dynactin Arp1 p62 subunit RO2.
    
 
 0.901
T310_1443
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 
 0.634
T310_3405
Uncharacterized protein.
   
 
 0.510
T310_4116
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 
 0.506
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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