STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_8314mRNA-nucleus export ATPase (Elf1). (1102 aa)    
Predicted Functional Partners:
T310_4311
Small nucleolar ribonucleoprotein complex subunit.
   
   0.999
T310_4894
WD repeat protein.
   
   0.999
T310_8202
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.997
T310_2244
Translation elongation factor eEF-3.
  
 
0.997
T310_3837
60S ribosomal protein L7.
   
 
 0.996
T310_8318
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.994
T310_7089
ToxD protein.
  
 
 0.994
T310_2693
Translation elongation factor eEF-1 subunit gamma.
   
 
 0.994
T310_9986
60S ribosomal protein L6.
   
 
 0.993
T310_4759
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.993
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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