STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T310_8306ATP dependent RNA helicase. (1168 aa)    
Predicted Functional Partners:
T310_8483
DEAH box polypeptide 36.
 
     0.925
T310_0777
AP-2 adaptor complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.884
T310_6696
Small nucleolar ribonucleoprotein complex subunit Utp14.
   
 0.821
T310_1721
AP-2 adaptor complex subunit sigma.
    
 0.812
T310_0293
rRNA biogenesis protein RRP5.
  
 0.808
T310_2136
Ribosome biogenesis protein Noc4.
   
  0.805
T310_8367
mRNA splicing factor (Prp17).
    
 0.803
T310_3593
Small nucleolar ribonucleoprotein complex subunit.
   
 0.785
T310_9989
Sas10 domain-containing protein.
   
 0.771
T310_7286
Small nucleolar ribonucleoprotein complex subunit.
   
  0.769
Your Current Organism:
Rasamsonia emersonii
NCBI taxonomy Id: 1408163
Other names: R. emersonii CBS 393.64, Rasamsonia emersonii CBS 393.64, Rasamsonia emersonii CBS393.64
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.